ABOUT THIS RECORDspecies: Zinnia violacea
miRNA family: MIR2911
source: miRNEST
Taxonomy by NCBI:
Zinnia violacea Zinnia Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGCCGGGGGACGGACTGGGAA miRNA* CCCTGTCCCGATCCCGTCGG mismatches: 5 bulges: 1 |
pre-miRNA
TCTGAGGGCTGGGCACGGGGGTCCCTGTCCCGATCCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCACCGCGTGCCGGCC
GGGGGACGGACTGGGAACGGCTTCTTCGGGGGCCTT
dot-bracket secondary structure
((((...((...)).))))..((((.((((...((((((((((((.((((((.((((((..(((((....)))))..)))))).)))))))).))))).)
))))...)))).))))..((((((....))))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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TCTGAGGGCTGGGCACGGGGGTCCCTGTCCCGATCCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCACCGCGTGCCGGCC
GGGGGACGGACTGGGAACGGCTTCTTCGGGGGCCTT
dot-bracket secondary structure
((((...((...)).))))..((((.((((...((((((((((((.((((((.((((((..(((((....)))))..)))))).)))))))).))))).)
))))...)))).))))..((((((....))))))..
SIMILARITIES| miRBase peu-MIR2911: 4e-32 PMRD peu-miR2911: 4e-32 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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