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ABOUT THIS RECORD

ID: MNEST002855
species: Bruguiera gymnorhiza
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACT

miRNA*
CTCAAGAAAGCTGTGGGAAA

mismatches: 1
bulges: 0

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pre-miRNA
GTCATGCTATTCCACAGCTTTCTTGAACTTTCTTGAACTGCTTTTTATAATTTTTGTATATAGCACCATACATGGAAGCTCAAGAAAGCTGTGGGAAAAC
ATGG


dot-bracket secondary structure
.(((((...(((((((((((((((((.(((((.((...((((...((((.......)))).)))).....)).))))).)))))))))))))))))...)
))))



SIMILARITIES
miRBase tcc-MIR396c: 0.00000000008

PMRD ath-miR396b: 0.00000000008

microPC miR396: 3e-44
UniProt no hits

RFAM MIR396: 0.000000001
most similar mature miRNAs

Identical with: miR396 from microPC (MNEST046563)

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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