ABOUT THIS RECORDspecies: Carica papaya
miRNA family: MIR1134
source: miRNEST
Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAACAACAAGAAGAAGAAGAT miRNA* CTTCTTCTTCTTCTTCTTCTT mismatches: 4 bulges: 0 |
pre-miRNA
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGCTAAAGGTCATGGCCATGGTGATCATCACACAGATCTTTCTTTACATGTTTCTTGTTTTGCT
TATTAAATGGTCTGCGGGTAAACAACAAGAAGAAGAAGATGACGAGATT
dot-bracket secondary structure
....(((.((.(((((((((((((.((.((..((((((((.((((.((((.....((.((((........))))..))....))))..))))..((((..
...)))).)))..)))))..)).)).))))))))))))).)).)))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCGCTAAAGGTCATGGCCATGGTGATCATCACACAGATCTTTCTTTACATGTTTCTTGTTTTGCT
TATTAAATGGTCTGCGGGTAAACAACAAGAAGAAGAAGATGACGAGATT
dot-bracket secondary structure
....(((.((.(((((((((((((.((.((..((((((((.((((.((((.....((.((((........))))..))....))))..))))..((((..
...)))).)))..)))))..)).)).))))))))))))).)).)))...
SIMILARITIES| miRBase tae-MIR1134: 0.0005 PMRD tae-miR1134: 0.0005 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
