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ABOUT THIS RECORD

ID: MNEST002873
species: Carica papaya
miRNA family: MIRf493
source: miRNEST

Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTCGGACCAGGCTTCATTCCC

miRNA*
 GAATGTTGTTTGGCTCGAGGT

mismatches: 3
bulges: 0
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pre-miRNA
 CTTCTGAGAGGTGGAGGTTAATGGGAATGTTGTTTGGCTCGAGGTCATCTGTGATAACCTCTGAAATTTTCTTAGGGGCCTTTTTACTTTCCCGGAAAATT
TCTGCATCTACATACCTCTAGTTGATCTCGGACCAGGCTTCATTCCCGTCAACCGAACACTTCTTTC

dot-bracket secondary structure
)....((((((((..((((.(((((((((..((((((.(((((((((.(((...........((((((((((..((((...........))))))))))))
))................))).))))))))).))))))..))))))))).))))...))))))))..


SIMILARITIES
miRBase csi-MIR166b: 2.0E-12

PMRD zma-miR166n: 3.0E-8

microPC miR166: 5.0E-7		UniProt no hits

RFAM 6mir-166: 9.0E-71		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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