miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST002881
species: Carica papaya
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Carica papaya Carica Caricaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACATCATCATCATCATCATCA

miRNA*
 ATAATGGAGACGATGATGACA

mismatches: 4
bulges: 0
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pre-miRNA
 CAGCCACCTGTACATCATCATCATCATCATCATCAAGATGGTACGGATGGTGGTGATAATTCGTCACGTGCAAATATCGAAACGTCGTCGTCTTCAGTGT
CAGATGGGACAATAGGTCAAGTCGAAAGTGACATGAACAACGTTTTTTATGAGACATGTGACGTGAATCATATCGATTGGTCGTATTGGAACATGTTGGA
TTCCGGAGTGACTGCATGCGATTTTGGGTTTGTCCCACCACCACCAGAACCAACCATTTTTGATAATGGAGACGATGATGACATCACCCCT

dot-bracket secondary structure
........(((.(((((((.((.((((.((((..((((((((..((.((((((((((....(((((((((...(((..(((((((.((.....(((.(((
(.(((..(((.....)))..)))......))))))))).))))))).)))....)))))))))...)))..((((..(((((((.((((((.........
)))))).)))))))....))))..((((.....))))..)))))))...)).)))))))))))).)))).)).))))))))))........


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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