ABOUT THIS RECORDspecies: Capsicum annuum
miRNA family: MIRf112
source: miRNEST
Taxonomy by NCBI:
Capsicum annuum Capsicum Capsiceae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGCATGTGCATGTGCACGTT miRNA* CCTGTTTGCATTTGTGGAT mismatches: 4 bulges: 2 |
pre-miRNA
CGTGAGTGTTTGCCTGTTTGCATTTGTGGATGTGGAGATTGAAACACCAAACACTGCAGCTGCTGCATGTGCATGTGCACGTTCACTTTCTT
dot-bracket secondary structure
...(((((...((.(((.(((((.(((((.(((((...(((......)))...)))))....))))).)))))...))).)).)))))....
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
CGTGAGTGTTTGCCTGTTTGCATTTGTGGATGTGGAGATTGAAACACCAAACACTGCAGCTGCTGCATGTGCATGTGCACGTTCACTTTCTT
dot-bracket secondary structure
...(((((...((.(((.(((((.(((((.(((((...(((......)))...)))))....))))).)))))...))).)).)))))....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
