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ABOUT THIS RECORD

ID: MNEST002885
species: Capsicum annuum
miRNA family: MIR1122
source: miRNEST

Taxonomy by NCBI:
Capsicum annuum Capsicum Capsiceae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCCCAAATTA

miRNA*
 TTTTTGGACGAGGAAGTATT

mismatches: 3
bulges: 1
View larger
pre-miRNA
 ATGTATTTACTACTCCCTCCGTCCCAAATTATCCGTCTCAAATTTTCTAATTTAATTTCTCGTTTTACTTGTCTTTTTTCATTAATCAAGAAGAAATAAT
TTTTTTTCATGTTTTATCCTTTGCATTAATTACTTTTACTTCAAATTAAAATATAAACATCATTTAATAGGGGTACTATGTTAAATTAATCATGTTATTA
ATTATTTTTCTTAATTAATGTGTCATCTCAATTTGGGACGAATATTTTTGGACGAGGAAGTATTTGTGAAT

dot-bracket secondary structure
....((((((((((.((((.((((.(((.(((.((((((((((..........................((........(((((((.(((((.(((((((
(......((((..(((...((.((((....((((((((.............................))))))))..)))).))..))).)))).....)
)))))))))))).)))))))........)))))))))))).))).))).)))))))).))))...))))))


SIMILARITIES
miRBase ssp-MIR1128: 0.0002

PMRD osa-miRf11705-akr: 0.0009

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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