ABOUT THIS RECORDspecies: Cenchrus ciliaris
miRNA family: MIRf541
source: miRNEST
Taxonomy by NCBI:
Cenchrus ciliaris Cenchrus Paniceae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGGCTCACATGTCAGTGAGAG miRNA* CTCAATGACATGCGGGCCAAA mismatches: 4 bulges: 0 |
pre-miRNA
AAACGAATCCTAAGTACTCAGAGGGACTCACACTCAATGACATGCGGGCCAAATCACAGCCGGGCTCACATGTCAGTGAGAGTAGTCCCTCTGCAGTACT
GCAGAGGAGAC
dot-bracket secondary structure
.......((((.((((((((((((((((.((.((((.(((((((.(((((............))))).))))))).)))).)))))))))))).))))))
....))))...
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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AAACGAATCCTAAGTACTCAGAGGGACTCACACTCAATGACATGCGGGCCAAATCACAGCCGGGCTCACATGTCAGTGAGAGTAGTCCCTCTGCAGTACT
GCAGAGGAGAC
dot-bracket secondary structure
.......((((.((((((((((((((((.((.((((.(((((((.(((((............))))).))))))).)))).)))))))))))).))))))
....))))...
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
