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ABOUT THIS RECORD
ID:
MNEST002913
species:
Cenchrus ciliaris
miRNA family:
MIRf45
source:
miRNEST
Taxonomy by NCBI:
Cenchrus ciliaris
Cenchrus
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ACTTTGGGGGAGTTTCTGGAC
miRNA*
CCAGTGAACTCCTTTTGGTTA
mismatches:
1
bulges:
2
View larger
pre-miRNA
GTGGGTGTGTGGGTTTGCGTGTGTTTCCTGT
ACTTTGGGGGAGTTTCTGGAC
GAGTGTGCAAGCAGCTGCAAGAACCGGAGCGGTTCACGTCTTTGCCCG
ACCTGCAGCAAACACAGCGTTTGAAAGTCGAGT
CCAGTGAACTCCTTTTGGTTA
GGTTAGGCGGATGAAGAAGAAACTCTCC
dot-bracket secondary structure
..((((......((((((.((.....((((.
(((..((((((((((((((((
...(((....)))((((((.((((((...))))))..(((.......)
)).)))))).(((.....)))(((...))).))
)))).)))))))))).)))))
)).)).)))))).........))))...
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record