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ABOUT THIS RECORD
ID:
MNEST002923
species:
Centaurea maculosa
miRNA family:
MIRf1164
source:
miRNEST
Taxonomy by NCBI:
Centaurea maculosa
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCATGAGGTCATGGGTTCAAG
miRNA*
TGAACTTGAGACTTCACCTTT
mismatches:
5
bulges:
0
View larger
pre-miRNA
ATAAAGACATAAGTTTTCTTTGGTTTAGTTGGTTAGTTAATTGCCTTATAA
CCATGAGGTCATGGGTTCAAG
TCTTATTAGAGACATTTTTTTAAGATTT
TGATTTCAAATTTAGTGTTATAAAAAAATTTGTTTGTACCAAGAAT
TGAACTTGAGACTTCACCTTT
GAAAAGCAATGAACCAACCACTAGACCAATAGA
GATTTTGTGTAAATT
dot-bracket secondary structure
......(((((((.(((((((((((((((.((((.(((.(((((.((.(((
...(((((((.(((((((((.
((((..((.(((((((((((((.(((.(
(((........)))).))).))))))))..))))).))..)))).)
)))))))).)))))))...))
).)).))))).))).)))))))))))))).)))
)).))))))).....
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf10975-akr
:
0.0007
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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