miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST002923
species: Centaurea maculosa
miRNA family: MIRf1164
source: miRNEST

Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCATGAGGTCATGGGTTCAAG

miRNA*
TGAACTTGAGACTTCACCTTT

mismatches: 5
bulges: 0

View larger
pre-miRNA
ATAAAGACATAAGTTTTCTTTGGTTTAGTTGGTTAGTTAATTGCCTTATAACCATGAGGTCATGGGTTCAAGTCTTATTAGAGACATTTTTTTAAGATTT
TGATTTCAAATTTAGTGTTATAAAAAAATTTGTTTGTACCAAGAATTGAACTTGAGACTTCACCTTTGAAAAGCAATGAACCAACCACTAGACCAATAGA
GATTTTGTGTAAATT


dot-bracket secondary structure
......(((((((.(((((((((((((((.((((.(((.(((((.((.(((...(((((((.(((((((((.((((..((.(((((((((((((.(((.(
(((........)))).))).))))))))..))))).))..)))).))))))))).)))))))...))).)).))))).))).)))))))))))))).)))
)).))))))).....



SIMILARITIES
miRBase no hits

PMRD osa-miRf10975-akr: 0.0007

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;