ABOUT THIS RECORDspecies: Centaurea maculosa
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCTTCTTCT miRNA* AAGGACGATGGAAAGGATGATG mismatches: 4 bulges: 1 |
pre-miRNA
GCGGACCTTCATCATCATCATCATCTTCTTCTTCCTCTTACCAAAAAATATGTTTAAAACCAAATGCGGTTGGTATGAGGTCCCTATCTCAGACAGGTCA
TCAGAAGCTTGTTGATAACCGCCGATCTCTTCGGGTGTTCGCCTTATTTGGAGGAAAGAAGGACGATGGAAAGGATGATGGAAAGGCA
dot-bracket secondary structure
.....((((..((((((((.(((((((((((((..((((.(((((.((..((..((.((((......)))).((.((((((....)))))).)).(((.(
((((.......))))).))).((((.....)))).))..))..)).))))))))))))))))).)))))....)))))))).))))..
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
GCGGACCTTCATCATCATCATCATCTTCTTCTTCCTCTTACCAAAAAATATGTTTAAAACCAAATGCGGTTGGTATGAGGTCCCTATCTCAGACAGGTCA
TCAGAAGCTTGTTGATAACCGCCGATCTCTTCGGGTGTTCGCCTTATTTGGAGGAAAGAAGGACGATGGAAAGGATGATGGAAAGGCA
dot-bracket secondary structure
.....((((..((((((((.(((((((((((((..((((.(((((.((..((..((.((((......)))).((.((((((....)))))).)).(((.(
((((.......))))).))).((((.....)))).))..))..)).))))))))))))))))).)))))....)))))))).))))..
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
