ABOUT THIS RECORDspecies: Centaurea maculosa
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Centaurea maculosa Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCATCG miRNA* GTGTTTGATGAAGATGGGAAA mismatches: 4 bulges: 2 |
pre-miRNA
GATTTCGTGTTTGATGAAGATGGGAAATGGATATTGCAGGGATGGAAGGGAAGGATACTGTATGCTAGTTCATGTTGGGTCCCTGCATAGTCCTCGTCAT
CATCATCATCATCATCGCCA
dot-bracket secondary structure
......(((..((((((.(((((((...((((..((((((((((((..((.((....)).....))..)))).......))))))))..))))...)).)
)))).)))))).))).....
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GATTTCGTGTTTGATGAAGATGGGAAATGGATATTGCAGGGATGGAAGGGAAGGATACTGTATGCTAGTTCATGTTGGGTCCCTGCATAGTCCTCGTCAT
CATCATCATCATCATCGCCA
dot-bracket secondary structure
......(((..((((((.(((((((...((((..((((((((((((..((.((....)).....))..)))).......))))))))..))))...)).)
)))).)))))).))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|P0C884|SCL34_ARATH: 0.000000004 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
