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ABOUT THIS RECORD

ID: MNEST002956
species: Centaurea solstitialis
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Centaurea solstitialis Centaurea Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTG

miRNA*
 GGTCATCTTGCAGCTTCAAT

mismatches: 1
bulges: 1
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pre-miRNA
 TATATATGTTGGTCTGAGAGATTGAAGCTGCCAGCATGATCTGGTGTTGTAAACCGGTACCTCTGTGTATGTATGTGTGTGTTTAATTTTCTTGCGTGTTG
TAAACCAGTAGTAACTATAAGGGGGTATGGATAGAAAACTCCTTAATTAACGGTTAATCTTTGTATGTGTTTTCTGGTGTGTGTGTGTGTGTGTGTGTGC
GCGTGTAAGTGTTTTAAGAGTAGCTAGGTGAAGAGAGGTTAATAAACCAGGTCATCTTGCAGCTTCAATCACTCATACCCAACAGTT

dot-bracket secondary structure
).....(((((((.((((.((((((((((((.((.((((((((((.((((.((((.....((((...(((.((.((.....(((((....((((((.....
((.(((((....(((.((.(((((((...........))))))).))..(((..(((...)))..))))))..))))).)).((((............))
)).))))))....)))))....)))).))).)))).)))).)))))))))))))))).)))))))))))).)))).).))))))...


SIMILARITIES
miRBase csi-MIR167c: 3.0E-10

PMRD gma-miR167o: 1.0E-9

microPC miR167: 4.0E-6		UniProt no hits

RFAM 1MIR167_1: 1.0E-9		most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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