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ABOUT THIS RECORD
ID:
MNEST002956
species:
Centaurea solstitialis
miRNA family:
MIR167
source:
miRNEST
Taxonomy by NCBI:
Centaurea solstitialis
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAAGCTGCCAGCATGATCTG
miRNA*
GGTCATCTTGCAGCTTCAAT
mismatches:
1
bulges:
1
View larger
pre-miRNA
ATATATGTTGGTCTGAGAGAT
TGAAGCTGCCAGCATGATCTG
GTGTTGTAAACCGGTACCTCTGTGTATGTATGTGTGTGTTTAATTTTCTTGCGTGTTG
TAAACCAGTAGTAACTATAAGGGGGTATGGATAGAAAACTCCTTAATTAACGGTTAATCTTTGTATGTGTTTTCTGGTGTGTGTGTGTGTGTGTGTGTGC
GCGTGTAAGTGTTTTAAGAGTAGCTAGGTGAAGAGAGGTTAATAAACCA
GGTCATCTTGCAGCTTCAAT
CACTCATACCCAACAGTT
dot-bracket secondary structure
.....(((((((.((((.(((
(((((((((.((.((((((((
((.((((.((((.....((((...(((.((.((.....(((((....((((((.....
((.(((((....(((.((.(((((((...........))))))).))..(((..(((...)))..))))))..))))).)).((((............))
)).))))))....)))))....)))).))).)))).)))).))))))))
)))))))).)))))))))))
).)))).).))))))...
SIMILARITIES
miRBase
csi-MIR167c
:
0.0000000003
PMRD
gma-miR167o
:
0.000000001
microPC
miR167
:
0.000004
UniProt
no hits
RFAM
MIR167_1: 0.000000001
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
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