ABOUT THIS RECORDspecies: Cicer arietinum
miRNA family: MIR156
source: miRNEST
Taxonomy by NCBI:
Cicer arietinum Cicer Cicereae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGTGAGCAC miRNA* GCTCACTTTCTATCTGTCACC mismatches: 0 bulges: 1 |
pre-miRNA
CGATTCTTATGAAGGTTAAAGGTAAAAGGAGGTGACAGAAGAGAGTGAGCACACATGTATTTTCTTGCATGATGTTTCATGCTTGAAGCTATGCGTGCTCA
CTTTCTATCTGTCACCCCATCTTCATCTTTTTCTTTTCAATATC
dot-bracket secondary structure
).........(((((..((((((.((.((.((((((((((((((((((((((.((((...((((..((((((....))))))..)))).)))).)))))))
)))))).)))))))))))...)).)))))).)))))........
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGATTCTTATGAAGGTTAAAGGTAAAAGGAGGTGACAGAAGAGAGTGAGCACACATGTATTTTCTTGCATGATGTTTCATGCTTGAAGCTATGCGTGCTCA
CTTTCTATCTGTCACCCCATCTTCATCTTTTTCTTTTCAATATC
dot-bracket secondary structure
).........(((((..((((((.((.((.((((((((((((((((((((((.((((...((((..((((((....))))))..)))).)))).)))))))
)))))).)))))))))))...)).)))))).)))))........
SIMILARITIES| miRBase mtr-MIR156b: 2.0E-27 PMRD ptc-miRf10647-akr: 3.0E-20 microPC miR156: 2.0E-9 | UniProt no hits RFAM 6mir-156: 1.0E-20 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
