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ABOUT THIS RECORD

ID: MNEST002975
species: Cichorium endivia
miRNA family: MIR393
source: miRNEST

Taxonomy by NCBI:
Cichorium endivia Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCCAAAGGGATCGCATTGATC

miRNA*
 TCATGCGATCTCTTTGGAAG

mismatches: 0
bulges: 1
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pre-miRNA
 CAGCAGGTGGAAGCTTCCAAAGGGATCGCATTGATCCGGTTTATCAATCGATTCGAGTTTGATTCATTCATCTATCATATCCATGGAAGCAGCTGCAAAT
TTTTTTATCCAATTTGATAATTTGGATCATGCGATCTCTTTGGAAGTTTCCGTCCGTG

dot-bracket secondary structure
.....((((((((((((((((((((((((((.(((((((.(((((((..(((..(((((((.........(((((.......)))))........)))))
))....)))....))))))).))))))))))))))))))))))))))))))).))...


SIMILARITIES
miRBase sbi-MIR393: 0.0000001

PMRD sbi-miR393: 0.0000001

microPC miR393: 1e-56		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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