miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST002983
species: Cichorium endivia
miRNA family: MIR4341
source: miRNEST

Taxonomy by NCBI:
Cichorium endivia Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGTGTTGAAAGTTGAACATGA

miRNA*
ATATTATATTATTGACACATT

mismatches: 5
bulges: 0

View larger

pre-miRNA
GATCATTTTTTTGTGTTGAAAGTTGAACATGATGCATATTATATTATTGACACATTGGGGGAGA

dot-bracket secondary structure
..((..(((..((((((((.(((..((.(((...))).))..))).))))))))..))).))..

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record