miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST002988
species: Artemisia annua
miRNA family: MIRf1313
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTATAATCCCAGCTACTCAG

miRNA*
 AAGTAGCTGGGACTACAGGTG

mismatches: 5
bulges: 0
View larger
pre-miRNA
 ACTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTACAACATGTGCCCGGCTAATTTTTGTATTTTTTGTAGAGATGGGGTTTTGCCGTGTTGGCCAGGCTA
GTCTCAGATTCCTGAGCTCAAGCAATTCGAATGCCAAGGTGGGCGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAACCCCTT
CTCTACCAAAAACTACAAAAATAGCTGGATGTGGGGGCGCACGACTATAATCCCAGCTACTCAGGAGGCTGA

dot-bracket secondary structure
).(((((((((..(((((((((((.((.((((((....(((((..(((((((.((((((((.((((((((((((.(((((((((((((((((((((((((.
((((..(((((((((.((((((..(((((..(((....)))..)))))..)))))).)))))))))..)))).))))))))))))))))))))))))).)
))))).)))))).)))))))))))))))))))).....))))..)).)).)))))))))))..)))))))))


SIMILARITIES
miRBase hsa-mir-5096: 9.0E-10

PMRD ptc-miRf12524-akr: 0.0009

microPC no hits		UniProt sp|Q96N38|ZN714_HUMAN: 4.0E-8

RFAM PMetazoa_SRP: 4.0E-31		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;