ABOUT THIS RECORDspecies: Artemisia annua
miRNA family: MIRf517
source: miRNEST
Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGAGAATGAGGTTGATCCACC miRNA* TGGATCCGCCTGGCTTTAC mismatches: 3 bulges: 2 |
pre-miRNA
AGGAAGAGAATGAGGTTGATCCACCGGAATAAGGACACGGGCATAGTGTAGGGCCGGTTTTGCAAAGGAAGAAAGTTTGGCCGACTATTCTTTATTATAA
AAGGAGTGAAGAGAATGAGAAAACAGCTAGATGATGTTCCGGAGTTGATTCAACGTATACAATTAGAATTGCCGTCAAAAGATGCGGCACGCACCTGCAT
CTTGTCCAAGTCATGGCTACAAGCTTGGTCTACCAGCCCTGCCATCAGGTTTTGTCCCACGTCTTTTGAAAAGCAACATGAAAGAAAGTACATGAGGTGG
ATCCGCCTGGCTTTACT
dot-bracket secondary structure
.((.((((....((((.((((((((...((..(((((.((((.....(((((((.(((........(((...((((((((((((((.(((((((((....
....))))))))).((((((...(((((...((......)).)))))((((..............))))((((((........)))))).((....)).)
)))))...))))..))))..))))))..)))))).)))))))......))))))))).((.((((((............))))))..))..))..)))))
))).))))..)))).))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AGGAAGAGAATGAGGTTGATCCACCGGAATAAGGACACGGGCATAGTGTAGGGCCGGTTTTGCAAAGGAAGAAAGTTTGGCCGACTATTCTTTATTATAA
AAGGAGTGAAGAGAATGAGAAAACAGCTAGATGATGTTCCGGAGTTGATTCAACGTATACAATTAGAATTGCCGTCAAAAGATGCGGCACGCACCTGCAT
CTTGTCCAAGTCATGGCTACAAGCTTGGTCTACCAGCCCTGCCATCAGGTTTTGTCCCACGTCTTTTGAAAAGCAACATGAAAGAAAGTACATGAGGTGG
ATCCGCCTGGCTTTACT
dot-bracket secondary structure
.((.((((....((((.((((((((...((..(((((.((((.....(((((((.(((........(((...((((((((((((((.(((((((((....
....))))))))).((((((...(((((...((......)).)))))((((..............))))((((((........)))))).((....)).)
)))))...))))..))))..))))))..)))))).)))))))......))))))))).((.((((((............))))))..))..))..)))))
))).))))..)))).))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
