miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
ABOUT THIS RECORD
ID:
MNEST002995
species:
Artemisia annua
miRNA family:
MIR1030
source:
miRNEST
Taxonomy by NCBI:
Artemisia annua
Artemisia
Artemisiinae
Anthemideae
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CCTGCACCTGCACCTGCACCA
miRNA*
CTGCGGGTGCGGGTTCGGGTT
mismatches:
4
bulges:
0
View larger
pre-miRNA
ATAAACCACCA
CCTGCACCTGCACCTGCACCA
GTTCAAGATTCAGGTTTAAGGGGCAGTGAGGAAGGTAGGGTTGGTGTTACACCGTCTTCGGTACCGGT
TTCTGGTGTGAATC
CTGCGGGTGCGGGTTCGGGTT
CTGCGCAG
dot-bracket secondary structure
..........(
((((.(((((((((((((...
(((((....(((((.....((.((...(((((.(((..............))).))))).)).))...
.)))))..))))).
.))))))))))))).))))).
........
SIMILARITIES
miRBase
ptc-MIR530a
:
0.00003
PMRD
ptc-miRf11026-akr
:
0.00003
microPC
miR1030
:
0.0004
UniProt
no hits
RFAM
MIR530: 0.0005
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record