ABOUT THIS RECORDspecies: Artemisia annua
miRNA family: MIRf34
source: miRNEST
Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TATGGGACGGAGGGAGTAAAA miRNA* GTACTCCCTCCGTCCCATACA mismatches: 3 bulges: 0 |
pre-miRNA
TAGTAATAAATAGTACTCCCTCCGTCCCATACAAAAATATTTATGGTCAAAGTTGAAAAAGAAAGACTTTAAAAAGTCAAACAGGACATTTAATATGGGA
CGGAGGGAGTAAAAGTGTAAAAC
dot-bracket secondary structure
((....)).....((((((((((((((((((..(((...((((.((((....((....))....)))).))))..(((......))).)))..)))))))
)))))))))))............
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
TAGTAATAAATAGTACTCCCTCCGTCCCATACAAAAATATTTATGGTCAAAGTTGAAAAAGAAAGACTTTAAAAAGTCAAACAGGACATTTAATATGGGA
CGGAGGGAGTAAAAGTGTAAAAC
dot-bracket secondary structure
((....)).....((((((((((((((((((..(((...((((.((((....((....))....)))).))))..(((......))).)))..)))))))
)))))))))))............
SIMILARITIES| miRBase bdi-MIR5164: 0.00002 PMRD osa-miR818d: 0.00009 microPC no hits | UniProt no hits RFAM MIR1122: 0.000007 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
