miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST003000
species: Artemisia annua
miRNA family: miR393a
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATCATGCTATCTCTTTGGATT

miRNA*
 TCCAAAGGGATCGCATTGATCC

mismatches: 2
bulges: 1
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pre-miRNA
 CGACGGCAAGTAAAGGAGGCATCCAAAGGGATCGCATTGATCCCAAATCTCATATATCAATAGGTTTGTGTATGTGTATATATAACGAGTTGGGATCATG
CTATCTCTTTGGATTTCTCCTTCGGTTGCTTCC

dot-bracket secondary structure
....(((((...(((((((.((((((((((((.((((.((((((((.((..((((((..(((..........)))..))))))...)).)))))))))))
).)))))))))))).)))))))...)))))...


SIMILARITIES
miRBase gma-MIR393: 0.0000000000001

PMRD gma-miR393: 0.0000000000001

microPC miR393: 4e-47		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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