miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST003004
species: Artemisia annua
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCCCTCCGTCCCAATTT

miRNA*
 ATTGGGACGGAGGGAGTACAT

mismatches: 1
bulges: 0
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pre-miRNA
 TCCAAAATAATACTCCCTCCGTCCCAATTTATTTGTCCACTTTTGACTTTTGAAGTCTTTCTTTTACAACTTTGACCTCAAATATTCTTTTGTGTGTTGT
ATAATACTTTATGCAAAATATATAAATTGATTGAGTTTTAAATGTATTTTCATTGGGTATAACTTCCATCAAGTATTATATAACATAAACAACACAATTT
AAGGTCAAAGTTGAGAAAGAAAGACTTCAAAAGTCAAAAGTAGACAAATAAATTGGGACGGAGGGAGTACATCATAGG

dot-bracket secondary structure
..........(((((((((((((((((((((((((((.(((((((((((((((((((((((((((.((((((((((((.((((.........((((((((
(((((((((.(((.((((((((((((((.....)))))...))))))))))))((((.......))))..))))))))))))))))).........))))
.)))))))))))).))))))))))))))))))))))))))).))))))))))))))))))))))))))).........


SIMILARITIES
miRBase no hits

PMRD ata-miR1122: 0.0009

microPC no hits		UniProt no hits

RFAM MIR1122: 0.00007		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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