miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST003009
species: Artemisia annua
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTACTCCCTCCGTTCCATAAT

miRNA*
TTTGGTTACGGAGGTTGTATGT

mismatches: 5
bulges: 1

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pre-miRNA
TGAACACCCCTAATTCATATATTACTCCCTCCGTTCCATAATAATTATTAGAGGCTGTGATGATAAAGTTCTAGAAATTGTCTGAGTTAGTCGTACAAAT
TATTTGAGATTTAACTGTATCTTGGCGGGGTAATTTAACTATTGCAGCCATGGCGGTTTTATCCTTTTTTTGTATTGATTGTTTTTTAAACAGATCTGAG
CCTCTGTTTATCATTTCATTATTTTGGTTACGGAGGTTGTATGTATAAAAGAATATGTTGTT


dot-bracket secondary structure
............((((.((((((((..(((((((.(((.((((((((.((((((((..(((......))).((((..((((.((((.((((((((((((.
.......(((..((((((....((((...(((((......))))).))))..))))))..))).....)))))).))))))...)))).)))).))))))
))))))..)).......)))))).)))..)))))))..))).)))))...))))........



SIMILARITIES
miRBase no hits

PMRD no hits

microPC miR1436: 0.0008
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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