miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST003011
species: Artemisia annua
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ATACTCCCTCCGTCCCAATTT

miRNA*
 ATTGAGACGGAGGGAGCAACT

mismatches: 4
bulges: 0
View larger
pre-miRNA
 GAGAAAAATAAATACTCCCTCCGTCCCAATTTATTTGTCTACTTTTGACTTTTGAAATATTTCTTTTACAATTTTGACCTCAAATATTCTTTTTGTGTTG
TATAATATTTGATGCAAAATATATGAATTGATTGAGTTTTAAATGTATTTTCATTGGGTATAACTTCCATCAAATATTATATTACAAACAACACAATTTA
AGGCCAAAGTTGAGAAAGAAAGACTTCAAAAGTCAAAAGTGGACAAATAAATTGAGACGGAGGGAGCAACTTATAAGGA

dot-bracket secondary structure
..............(((((((((((.((((((((((((((((((((((((((((((...((((((((.((((((((.(((.((((........(((((((
((((((((((((((.((....((((..(((((.(((...((....)).))).))))).))))..)).))))))))))))).......)))))))))))).
))).)))))))).))))))))...)))))))))))))))))))))))))))))).))))))))))).............


SIMILARITIES
miRBase tae-MIR1122: 0.0002

PMRD hpi-miR1122: 0.00006

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;