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ABOUT THIS RECORD
ID:
MNEST003012
species:
Artemisia annua
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Artemisia annua
Artemisia
Artemisiinae
Anthemideae
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCCTCCGTCCCAAAAA
miRNA*
TTTGGGACGGAGAGAGTATTC
mismatches:
1
bulges:
0
View larger
pre-miRNA
TACTAAAAAAA
ATACTCCCTCCGTCCCAAAAA
GAGAGTCTACAAACAAAAAATGTAGAAATTATGATATGTATAATTAATGCTAGTTTTGATTGATAAAA
AATCATTTTTACCCTCATAATTAATATAGAAATAAAAAATGTGTAATTAATGCAAGTTTTAATTAGAAGGGTAAAGTAGGAAAATCAGTCATAATTACTG
TCCATATATAAAAACTGGACACTTATTTTATGACAAACATAAATAGTAAGATTGACTCTTTT
TTTGGGACGGAGAGAGTATTC
GTATAGCT
dot-bracket secondary structure
..........(
((((((.((((((((((((((
(((((((..(((.(((((...(((..(((((((.....)))))))..)))...))))).)))......
..((..(((((((((..((((((...((....))..((((.((((.....)))).))))))))))..)))))))))...)).((((.(((((((.((.((
((((...........))))))..))..)))))))..((.......))..)))))))))))))
)))))))))))).))))))).
........
SIMILARITIES
miRBase
tae-MIR1122
:
0.001
PMRD
tae-miR1122
:
0.001
microPC
miR1439
:
0.00006
UniProt
no hits
RFAM
MIR806: 0.0003
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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