ABOUT THIS RECORDspecies: Artemisia annua
miRNA family: MIRf341
source: miRNEST
Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATACTCCCTCCGTCTCAAAAT miRNA* TTTGAGACGGAGGGAGTAACA mismatches: 1 bulges: 0 |
pre-miRNA
CGTAGTTTTATACTCCCTCCGTCTCAAAATTATTGTCCACATTTTCATTTTAGGATGTCTCAAATTAATTGTCCACGTTCCTCTTTGAGTGGTTGAAAAC
AAAACTGGCCCCACTTTTATTAAACTTTGTAATTCTTGTCTTCTGACAATAATTTTGAGACGGAGGGAGTAACAAAAACA
dot-bracket secondary structure
....(((((.(((((((((((((((((((((((((((.((...((((....((((.((..(((.....)))...))..))))...))))..)).(((.((
((.................................)))).))).)))))))))))))))))))))))))))...))))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CGTAGTTTTATACTCCCTCCGTCTCAAAATTATTGTCCACATTTTCATTTTAGGATGTCTCAAATTAATTGTCCACGTTCCTCTTTGAGTGGTTGAAAAC
AAAACTGGCCCCACTTTTATTAAACTTTGTAATTCTTGTCTTCTGACAATAATTTTGAGACGGAGGGAGTAACAAAAACA
dot-bracket secondary structure
....(((((.(((((((((((((((((((((((((((.((...((((....((((.((..(((.....)))...))..))))...))))..)).(((.((
((.................................)))).))).)))))))))))))))))))))))))))...))))).
SIMILARITIES| miRBase tae-MIR1122: 0.00004 PMRD tae-miR1122: 0.00004 microPC miR1439: 0.0006 | UniProt no hits RFAM MIR1122: 0.0000007 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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