ABOUT THIS RECORDspecies: Artemisia annua
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Artemisia annua Artemisia Artemisiinae Anthemideae Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCGTCATCATCATCATCA miRNA* ATGATGATAATGATGATGAT mismatches: 2 bulges: 0 |
pre-miRNA
GGTCATCGTCATCATCATCATCATCATCAAACCTATTCCATCACTCTGTTTCTAGGGTTTCAGATTCTTCTTTATCCGTTTGTCGTTGCAGTAGTAACGG
TTTTCAGGAGAGTGTAAGGAGTGTGATTAAGTGGTTTGATGAGTATGTTATTGGTTATAAAAAGTATGACATGAAAGATGATGATAATGATGATGAT
dot-bracket secondary structure
.(((((((((((.(((((((((.((((((((((...((...((((((..((((.((((...(((....)))..)))).(((((((((((....)))))))
....)))))))).....)))))).))......)))))))))).((((((((...((....))...))))))))...))))))))).)))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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GGTCATCGTCATCATCATCATCATCATCAAACCTATTCCATCACTCTGTTTCTAGGGTTTCAGATTCTTCTTTATCCGTTTGTCGTTGCAGTAGTAACGG
TTTTCAGGAGAGTGTAAGGAGTGTGATTAAGTGGTTTGATGAGTATGTTATTGGTTATAAAAAGTATGACATGAAAGATGATGATAATGATGATGAT
dot-bracket secondary structure
.(((((((((((.(((((((((.((((((((((...((...((((((..((((.((((...(((....)))..)))).(((((((((((....)))))))
....)))))))).....)))))).))......)))))))))).((((((((...((....))...))))))))...))))))))).)))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM snoZ5: 0.0002 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record
