miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST003028
species:
Artemisia annua
miRNA family:
MIR414
source:
miRNEST
Taxonomy by NCBI:
Artemisia annua
Artemisia
Artemisiinae
Anthemideae
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCATCATCATCATCATCATCA
miRNA*
GTGAACGTGCTGATGGTGAAG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TCT
TCATCATCATCATCATCATCA
TCATCATCATCATATTCGATCCACTAATTAAATTAATTATACCAAAATCAAATGCATATCACTATTTAATTAATTC
AAATTTGAGTGATCACTTGTTAAAAATGGAGGTTGACGGTGACGTGGAAATGAAAACAGAGGGGGGATTATTAGATTGGAAATTTTCTCAGGTTTTTG
GT
GAACGTGCTGATGGTGAAG
dot-bracket secondary structure
.((
(((((((((.(((..((((((
((((..(((((((..((((((...((((((...))))))..(((....(((.((...((((((....((((.....
.))))..)))))))).))).......))).))))))..))))..)))..))))((((...(((((((((.((.....)).)))))))))..)))).))
))
))..))).)))))))))))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
not a miRNA
Source sequences
download this record