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ABOUT THIS RECORD

ID: MNEST003043
species: Brachypodium distachyon
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTACTCCCTCTGTCCCATATT

miRNA*
 TATGAGACGGAAGGAGTATAT

mismatches: 2
bulges: 0
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pre-miRNA
 AGGACTATCTATGTACTCCCTCTGTCCCATATTAAGTGATAAAATATTACATGTATCTAGATGTTTATTTTTTGTATAGATACATTCATATTTGGGCAAAT
TTGAGTCACTTAATATGAGACGGAAGGAGTATATGTTGTGCA

dot-bracket secondary structure
)..((....((((((((((.((((((.(((((((((((((.((((((...(((((((((.((...........)).)))))))))..))))))...((...
.)).))))))))))))).)))))).))))))))))..))...


SIMILARITIES
miRBase bdi-MIR5171: 2.0E-12

PMRD bdi-miR1135: 7.0E-6

microPC no hits		UniProt no hits

RFAM 2MIR1122: 3.0E-27		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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