miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST003053
species: Brachypodium distachyon
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CCTCCGTCCAAAAATAAGTGA

miRNA*
 ACTTATTTTGGGACTGAGGAA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 CAGATCTGATCCAAATAGCCGGTACTTAATTACTCCCTCCGTCCAAAAATAAGTGACTTGGATTTGTATAAATTCTTTTACAAACGCTCGCCACTTATTT
TGGGACTGAGGAAGTACTTAACATTATTTGGTTCACATTATTTTT

dot-bracket secondary structure
..(((.(((.((((((((...((...(((.((((.((((.((((.((((((((((...(((.((((((.((....)).))))))...))).)))))))))
).)))).)))).)))).))))).)))))))).))).)))......


SIMILARITIES
miRBase far-MIR1122: 0.0001

PMRD bdi-miR2502: 0.0000000005

microPC miR1439: 0.000002		UniProt no hits

RFAM MIR1122: 0.000002		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record




Liczniki na strone;