ABOUT THIS RECORDspecies: Brachypodium distachyon
miRNA family: MIR2507
source: miRNEST
Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAGTCTAATTGGTGGTCAAA miRNA* TGACCACCAATTAGACCAACA mismatches: 1 bulges: 0 |
pre-miRNA
CAAAATTTTGGTTTGACCACCAATTAGACCAACAAAATATGAATTATGTATTATAAAAATTATACCATCCGAAACTTCTTTTAATATGAATCTACTGGTA
TAATTTGTATACCACATAATTCACATTTTTTTAGTCTAATTGGTGGTCAAAGTTGGATCTC
dot-bracket secondary structure
...........((((((((((((((((((.((.(((((.((((((((((..((((.(((((((((((...((...(((.........)))))...)))))
)))))).))))..)))))))))).))))).)).))))))))))))))))))..........
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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CAAAATTTTGGTTTGACCACCAATTAGACCAACAAAATATGAATTATGTATTATAAAAATTATACCATCCGAAACTTCTTTTAATATGAATCTACTGGTA
TAATTTGTATACCACATAATTCACATTTTTTTAGTCTAATTGGTGGTCAAAGTTGGATCTC
dot-bracket secondary structure
...........((((((((((((((((((.((.(((((.((((((((((..((((.(((((((((((...((...(((.........)))))...)))))
)))))).))))..)))))))))).))))).)).))))))))))))))))))..........
SIMILARITIES| miRBase no hits PMRD bdi-miR2507b: 0.000000000009 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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