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ABOUT THIS RECORD

ID: MNEST003063
species: Brachypodium distachyon
miRNA family: MIR1120
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 ACTCCCTCCGTTCCATAATAT

miRNA*
 ATCATGGAACGGAGGGAGTAT

mismatches: 1
bulges: 0
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pre-miRNA
 TGTTATACACTCCCTCCGTTCCATAATATAAGGCACGCACGCATTTCAAAATTTTGGTTTGACCACCAATTAGACCAACAAAATATGAATTATGTATTAT
AAAAATTATACCATCCGAAACTTCTTTTAATATGAATCTACTGGTATAATTTGTATACCACATAATTCACATTTTTTTAGTCTAATTGGTGGTCAAAGTT
GGATCTCGAAATGCGTGGACACCTTATATCATGGAACGGAGGGAGTATATTGC

dot-bracket secondary structure
.((.(((.((((((((((((((((.((((((((....((((((((((...((((...((((((((((((((((((.((.(((((.((((((((((..(((
(.(((((((((((...((...(((.........)))))...))))))))))).))))..)))))))))).))))).)).))))))))))))))))))...
))))...))))))))))....)))))))).)))))))))))))))).))).))


SIMILARITIES
miRBase osa-MIR818d: 0.0002

PMRD bdi-miR2507b: 0.00000000001

microPC miR1436: 0.000003		UniProt no hits

RFAM MIR806: 0.00002		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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