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ABOUT THIS RECORD
ID:
MNEST003070
species:
Brachypodium distachyon
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Brachypodium distachyon
Brachypodium
Brachypodieae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTACTCCCTCCGTTCCAAAAT
miRNA*
TTTGTAACGGAGGGAGTACTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
CCCAAATGT
GTACTCCCTCCGTTCCAAAAT
ATAGGGGGTATAACTTTTCTTGACGGTCAAACTTTATAAACTTTGACCAACCATAAAACAAAAATCTAGT
GTCAAATGTGTATCATTAGATACATTGTGAAATATATCTTCATATTATCTTGGTTTGACGTTGTAGATGTTGATATATTTAATTATATCGTTGGTCAAAG
TATAGAAAATTTGACAGTGAACAAAAGTTATACACCATACAT
TTTGTAACGGAGGGAGTACTT
GGTATG
dot-bracket secondary structure
.((((....
((((((((((((((.((((((
.((..(((((((((((((.((.((.((((((.(((.((.((((((((((((.(((..((((..(((((((
(.((....))...))))))))...)))).(((((((((..(((..((...((......)).))...)))..))))))))).....))).)))))))))))
).)).))).)))))).)).)).))))))))))).)).)).))
)))).))))))))))))))))
))....
SIMILARITIES
miRBase
tae-MIR1137
:
0.00006
PMRD
osa-miRf11780-akr
:
0.000004
microPC
miR1439
:
0.0002
UniProt
no hits
RFAM
MIR1122: 0.00002
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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