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ABOUT THIS RECORD

ID: MNEST003071
species: Brachypodium distachyon
miRNA family: MIR164
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGGAGAAGCAGGGCACGTGCA

miRNA*
 CATGTGTTCTTCTCCTCCATC

mismatches: 2
bulges: 0
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pre-miRNA
 GCTCAGCGAGAAGGACCGCGTTGGAGAAGCAGGGCACGTGCATGCATGCAACTAGAGCTTAGCTAGTGTCAATTCTTCCATCTCTTGTGCCTGGCCGGGA
TCGATCTTATATACCGAGCGTAATTTGGCACCTATTGGATGCTGCATGCATGTGTTCTTCTCCTCCATCACGGTCTTCATTTCTCTC

dot-bracket secondary structure
.......(((((((((((...(((((.((.((((((((((((((((.((((((((.......))))).........((((......(((((..(((((..
.............))).)).......)))))....))))))))))))))))))))))).)).)))))...))))))....)))))..


SIMILARITIES
miRBase bdi-MIR164b: 3e-101

PMRD osa-miR164a: 7e-16

microPC miR164: 0.00004		UniProt no hits

RFAM MIR164: 0.000000000003		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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deep sequencing data evidence




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