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ABOUT THIS RECORD
ID:
MNEST003072
species:
Brachypodium distachyon
miRNA family:
MIR444
source:
miRNEST
Taxonomy by NCBI:
Brachypodium distachyon
Brachypodium
Brachypodieae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGTTGTCTCAAGCTTGCTGCC
miRNA*
TGACAAACTTGAGGCAGCAAC
mismatches:
2
bulges:
0
View larger
pre-miRNA
ATTGATGCAAGGGGTGG
TGACAAACTTGAGGCAGCAAC
TGCATATCTTGCAAGAAAATTGGGTTTCAGAGCATACCGATGATTTTCTTGCAAGTTGTGCA
GT
TGTTGTCTCAAGCTTGCTGCC
TCCCTTTGCCAAAA
dot-bracket secondary structure
......((((((((.((
((.(((.((((((((((((((
((((((.((((((((((((((((((..........)))..))))))))))))))).))))))
))
)))))))))))).))).))))
.)))))))).....
SIMILARITIES
miRBase
osa-MIR444b
:
4e-41
PMRD
pvi-miR444
:
3e-51
microPC
miR444
:
4e-38
UniProt
sp|Q6EP49|MAD27_ORYSJ: 0.00001
RFAM
MIR444: 8e-46
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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