ABOUT THIS RECORDspecies: Brachypodium distachyon
miRNA family: MIR2503
source: miRNEST
Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCCGTCCTAAAATAAGTGACG miRNA* TCACTTATTGTGAAACGGAGG mismatches: 4 bulges: 0 |
pre-miRNA
TATTAGTTGCTTTATACATCCTCCGTCCTAAAATAAGTGACGTGGATTTGTACATTCAAGTCACTTATTGTGAAACGGAGGGAGTAGTATATATAGCAC
dot-bracket secondary structure
.......((((.(((((.((((((((..((.((((((((((.(((((......))))).)))))))))).))..))))))))....)))))...)))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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TATTAGTTGCTTTATACATCCTCCGTCCTAAAATAAGTGACGTGGATTTGTACATTCAAGTCACTTATTGTGAAACGGAGGGAGTAGTATATATAGCAC
dot-bracket secondary structure
.......((((.(((((.((((((((..((.((((((((((.(((((......))))).)))))))))).))..))))))))....)))))...)))).
SIMILARITIES| miRBase osa-MIR441a: 0.000005 PMRD bdi-miR2503: 0.00000000008 microPC no hits | UniProt no hits RFAM MIR1122: 0.000005 | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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