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ABOUT THIS RECORD
ID:
MNEST003087
species:
Brachypodium distachyon
miRNA family:
MIR1122
source:
miRNEST
Taxonomy by NCBI:
Brachypodium distachyon
Brachypodium
Brachypodieae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TAGATACATCCATATTTGGAC
miRNA*
CAAAATATTACATGTATCTAGA
mismatches:
3
bulges:
1
View larger
pre-miRNA
CCATATTGTTTGT
CAAAATATTACATGTATCTAGA
CCCTTTTTAGGCA
TAGATACATCCATATTTGGAC
AAATTTGAGA
dot-bracket secondary structure
.((....((((((
(.((((((...(((((((((..
.(((....)))..
)))))))))..)))))).)))
)))).))...
SIMILARITIES
miRBase
bdi-MIR1135
:
2e-17
PMRD
bdi-miR1135
:
2e-17
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 5e-24
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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