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ABOUT THIS RECORD

ID: MNEST003097
species: Brachypodium distachyon
miRNA family: MIR1436
source: miRNEST

Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTATTATGGGACGGAGGGAGT

miRNA*
 TCCCTCCCTACCATAATATGA

mismatches: 3
bulges: 0
View larger
pre-miRNA
 TACTCCCTCCCTACCATAATATGAGACACGTACGCATCCCTATATCGTCAATTTAGCTAACTAAATATAAATTAAATAATTAAAAAAATATATCATTAGA
AAGTTCTTTTGATAACGAATCTAATGATATACTTCTTGTTAAGAAACATATATATTTAACTAATCAAATTGAGAATTTAGTAATGCGTGCGTGCCTCGTA
TTATGGGACGGAGGGAGT

dot-bracket secondary structure
.(((((((((...((((((((((((.(((((((((((..(((..((.(((((((.......((((((((.((..........((.((.((((((((((((
..(((........)))...)))))))))))).)).))..........)).)))))))).......)))))))))...)))..))))))))))).))))))
))))))...)))))))))


SIMILARITIES
miRBase tae-MIR1120: 0.0007

PMRD tae-miR1120: 0.0007

microPC miR1436: 0.0007		UniProt no hits

RFAM no hits		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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