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ABOUT THIS RECORD
ID:
MNEST003106
species:
Brachypodium distachyon
miRNA family:
MIRf341
source:
miRNEST
Taxonomy by NCBI:
Brachypodium distachyon
Brachypodium
Brachypodieae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATACTCCTTCCGTCCCATATT
miRNA*
TATGAGACGGAGGGAGTAGCT
mismatches:
2
bulges:
0
View larger
pre-miRNA
TAACTGTCTAA
ATACTCCTTCCGTCCCATATT
AAGTGTCGAAATATTGCATGTATCTAACGTATTTTAATATATAGATACGTCCATATTTAAACAAATTC
GAGTTACTTAA
TATGAGACGGAGGGAGTAGCT
TTTAATCT
dot-bracket secondary structure
...........
.(((((((((((((.((((((
((((((((((....((.(((((((((..((((....)))).))))))))).))............)))
))..)))))))
)))).)))))))))))))...
........
SIMILARITIES
miRBase
bdi-MIR5183
:
0.00003
PMRD
asa-miR1122
:
0.0001
microPC
no hits
UniProt
no hits
RFAM
MIR1122: 3e-36
most similar mature miRNAs
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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