ABOUT THIS RECORDspecies: Brachypodium distachyon
miRNA family: miR2931
source: miRNEST
Taxonomy by NCBI:
Brachypodium distachyon Brachypodium Brachypodieae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTTATTGTTGAAGTCAAACC miRNA* TGTGCTCGCAAATGAACCA mismatches: 4 bulges: 2 |
pre-miRNA
AGATGCTTGATCACCTGGAGAGTGTGCTCGCAAATGAACCAGTCTCTGTCAAGAGTGGCCAGTTTATTGTTGAAGTCAAACCACAGGGAGTAAGCAAGGG
A
dot-bracket secondary structure
...((((((.((.((((....((.((((((..(((((((..((((((....))))..))..)))))))..)).)).)).))..)))))).))))))....
.
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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AGATGCTTGATCACCTGGAGAGTGTGCTCGCAAATGAACCAGTCTCTGTCAAGAGTGGCCAGTTTATTGTTGAAGTCAAACCACAGGGAGTAAGCAAGGG
A
dot-bracket secondary structure
...((((((.((.((((....((.((((((..(((((((..((((((....))))..))..)))))))..)).)).)).))..)))))).))))))....
.
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9LMI0|TPS7_ARATH: 0.000000001 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record
