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ABOUT THIS RECORD

ID: MNEST003127
species: Citrus clementina
miRNA family: MIR167
source: miRNEST

Taxonomy by NCBI:
Citrus clementina Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGAAGCTGCCAGCATGATCTG

miRNA*
 GATCATCTGGCAGTTTCACC

mismatches: 0
bulges: 1
View larger
pre-miRNA
 CATCGTGTCATATTCGTGCACTAGTAGTAGTTGAAGCTGCCAGCATGATCTGAACTTTCCTTGACCTCCATCTCTAGGGAAAGGCCAGATCATCTGGCAG
TTTCACCTATTGATGGTAGCATGGCCAGAAACCCT

dot-bracket secondary structure
....((.((....((((((((((.((((((.((((((((((((.((((((((..(((((((((...........)))))))))..)))))))))))))))
))))).)))))).)))).))))))...)).))...


SIMILARITIES
miRBase ccl-MIR167b: 4e-66

PMRD cle-miR167: 2e-49

microPC miR167: 2e-36		UniProt no hits

RFAM MIR167_1: 0.0000000000001		most similar mature miRNAs

Identical with: ccl-MIR167a from miRBase (MNEST041208)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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