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ABOUT THIS RECORD

ID: MNEST003159
species: Helianthus annuus
miRNA family: MIR156
source: miRNEST

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCACA

miRNA*
 TGCTCACTGCTCTATCTGTCATC

mismatches: 1
bulges: 2
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pre-miRNA
 TTTTTTATTTCATGTCTTGCTTACCCTATTTAGAGATCAGATATAGATAGAAATGACAGAAGAGAGTGAGCACACAAAGCCGAATTGTACCGAAGTGACTT
GTTGTATGATTGATTTGGGTGCTCACTGCTCTATCTGTCATCTTCATTCTTAATCATCTCAAAGGGTGTGATGACTGATGTGTCTGTCTAT

dot-bracket secondary structure
)....(((.(((.(((.....((((((..((.(((((..(((..(((..((((((((((((((((((((((((.((((....(((((((((((......))
)..))))))))..)))).))))))))).)))).)))))))).)))..)))..))))))))))))))))....)))))).))).........


SIMILARITIES
miRBase ath-MIR156d: 2.0E-7

PMRD ath-miRf10567-akr: 2.0E-7

microPC miR156: 1.0E-26		UniProt no hits

RFAM 6mir-156: 3.0E-6		most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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