ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR414
source: miRNEST
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCATCATCATCATCTTGC miRNA* AAGAGGTGGACTTGTGAAG mismatches: 4 bulges: 2 |
pre-miRNA
ACTGGGCAACAAGAGGTGGACTTGTGAAGACAGATTGGACACAAGCTCCATTCACAGCATCATATAGAAATTTCAATGCCAATGCCTGCGTCCATTCTGG
ATCATCATCATCATCATCATCTTGCACTGCCA
dot-bracket secondary structure
....((((.((((((((((...(((((.((((((.(((((.((.((..........((((...............))))....)).)).))))).)))).
.)).))).))...))))).)))))...)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
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ACTGGGCAACAAGAGGTGGACTTGTGAAGACAGATTGGACACAAGCTCCATTCACAGCATCATATAGAAATTTCAATGCCAATGCCTGCGTCCATTCTGG
ATCATCATCATCATCATCATCTTGCACTGCCA
dot-bracket secondary structure
....((((.((((((((((...(((((.((((((.(((((.((.((..........((((...............))))....)).)).))))).)))).
.)).))).))...))))).)))))...)))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q38907|XTH25_ARATH: 0.0000000009 RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
degradome data
download this record
