miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST003201
species:
Arabidopsis thaliana
miRNA family:
MIRf249
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAATCCGGCGAATTTTCAGCC
miRNA*
CTGAAATCGCTGGATTTTG
mismatches:
2
bulges:
2
View larger
pre-miRNA
TCTGTTGTGGAA
CTGAAATCGCTGGATTTTG
GGGTTTTCATGAGTAAGAAGGGTACTCCAGGAT
GAATCCGGCGAATTTTCAGCC
TCCAAATCC
dot-bracket secondary structure
.......((((.
(((((((((((((((((((
((((..((............)).))))))....
)))))))))))..))))))..
)))).....
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10437-akr
:
1e-27
microPC
no hits
UniProt
no hits
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record