ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf305
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTCGAGTGAAGTGATCGAGT miRNA* TCGATCACTTCACTCGACCTG mismatches: 0 bulges: 0 |
pre-miRNA
CGGGCACGAGAGTCACTCGATCACTTCACTCGACCTGGGGGTCGAGTGAAGTGATCGAGTGACACTCGTGCCC
dot-bracket secondary structure
.(((((((((.((((((((((((((((((((((((....)))))))))))))))))))))))).)))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
CGGGCACGAGAGTCACTCGATCACTTCACTCGACCTGGGGGTCGAGTGAAGTGATCGAGTGACACTCGTGCCC
dot-bracket secondary structure
.(((((((((.((((((((((((((((((((((((....)))))))))))))))))))))))).)))))))))
SIMILARITIES| miRBase no hits PMRD ath-miRf10380-akr: 0.0000000000009 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
