ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf455
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGAGAGAGGGTTTAAGGCTT miRNA* GCCTTGAAACTTCTTCTTTG mismatches: 1 bulges: 1 |
pre-miRNA
TGGTTGAGGAAAGAGTAGAGAAAGAGAGAGGGTTTAAGGCTTTTTAGGGTTTTTAAGTGGAGAGCCTTGAAACTTCTTCTTTGACTCTTGAGGGTTAAAA
T
dot-bracket secondary structure
..........((((((....(((((.(((((.((((((((((((((...........)))))))))))))).)))))))))).))))))...........
.
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
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TGGTTGAGGAAAGAGTAGAGAAAGAGAGAGGGTTTAAGGCTTTTTAGGGTTTTTAAGTGGAGAGCCTTGAAACTTCTTCTTTGACTCTTGAGGGTTAAAA
T
dot-bracket secondary structure
..........((((((....(((((.(((((.((((((((((((((...........)))))))))))))).)))))))))).))))))...........
.
SIMILARITIES| miRBase no hits PMRD ath-miRf10993-akr: 3e-38 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
Identical with: ath-miRf10993-akr from PMRD (MNEST048093) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
Source sequences
degradome data
download this record
