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ABOUT THIS RECORD
ID:
MNEST003227
species:
Arabidopsis thaliana
miRNA family:
MIRf197
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCGTTGATGATTTCTGAGTA
miRNA*
CTCAAGATCTCAATCTGAG
mismatches:
3
bulges:
2
View larger
pre-miRNA
ATCACACT
CTCGTTGATGATTTCTGAGTA
AGAGTGACCTTTCTTC
CTCAAGATCTCAATCTGAG
CCATC
dot-bracket secondary structure
......((
(..(((((.(((((.((((.(
((((......))))).
))))))))))))))..)))
.....
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11797-akr
:
0.0007
microPC
no hits
UniProt
sp|Q01292|ILV5_SPIOL: 0.00007
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
download this record