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ABOUT THIS RECORD
ID:
MNEST003238
species:
Arabidopsis thaliana
miRNA family:
MIRf372
source:
miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTGTGGAGAGGAATCAAGGC
miRNA*
TTGAAGTCCTTTTCTACAAACT
mismatches:
5
bulges:
1
View larger
pre-miRNA
GTATCAGCGAGC
TTGAAGTCCTTTTCTACAAACT
GAACAATGCAATACGAAAGCTGTTGGTGATAGACTGATGAACATTTAGG
CTTGTGGAGAGGAATCA
AGGC
TCGCAAAAG
dot-bracket secondary structure
......((((((
((....((((((.((((((.((
....((((..((.....(((((((...))))).)).))...))))..))
.))))))))))))....
))))
)))).....
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|Q9LVE2|2A5Z_ARATH: 0.000000000000005
RFAM
no hits
most similar mature miRNAs
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
Source sequences
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