ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf427
source: miRNEST
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGAGCAAGAGCAGCTGCTTT miRNA* AGCTGTGGCTCTTGTGCTNCCT mismatches: 3 bulges: 1 |
pre-miRNA
CGTGATCTAAGGAGAGCAAGAGCAGCTGCTTTGAACATTGTTCCTACTTCTACAGGNGCAGGTAAAGCTGTGGCTCTTGTGCTNCCTAACCTCAA
dot-bracket secondary structure
..(((....(((((.((((((((.((.((((((....((((.(((........))).)))).)))))).)).)))))))).)).)))....))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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CGTGATCTAAGGAGAGCAAGAGCAGCTGCTTTGAACATTGTTCCTACTTCTACAGGNGCAGGTAAAGCTGTGGCTCTTGTGCTNCCTAACCTCAA
dot-bracket secondary structure
..(((....(((((.((((((((.((.((((((....((((.(((........))).)))).)))))).)).)))))))).)).)))....))).
SIMILARITIES| miRBase no hits PMRD ath-miRf10919-akr: 1e-31 microPC no hits | UniProt no hits RFAM no hits | most similar mature miRNAs |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
Source sequences
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